Review



matlab toolbox msdanalyzer  (MathWorks Inc)


Bioz Verified Symbol MathWorks Inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 90

    Structured Review

    MathWorks Inc matlab toolbox msdanalyzer
    Matlab Toolbox Msdanalyzer, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msdanalyzer+for+matlab/pmc11900878__sciadv__adt8213_sm-141-23-23
    Average 90 stars, based on 1 article reviews
    matlab toolbox msdanalyzer - by Bioz Stars, 2026-10
    90/100 stars

    Images

    Related Articles

    Virus:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.

    Recombinant:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.

    Injection:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.

    Transgenic Assay:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.

    Expressing:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.

    Phospho-proteomics:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.

    Software:

    Article Title: Investigation of Cell Mechanics and Migration on DDR2-Expressing Neuroblastoma Cell Line
    Article Snippet: of cells were analyzed from the time-lapse images using ImageJ. .. The mean square displacement (MSD) of each individual cell was then calculated from the cell trajectory using the MSDAnalyzer [ ] for MATLAB. .. The MSD for each cell type was calculated from the average MSD of individ

    Article Title: A single-cell biochemistry approach reveals PAR complex dynamics during cell polarization
    Article Snippet: particle tracking software for MATLAB , Jaqaman et al. 2008 , Version 2.1.3; http://lccb.hms.harvard.edu/software.html. .. MSDanalyzer for MATLAB , Tarantino et al. 2014 , https://tinevez.github.io/msdanalyzer/. .. PIVlab , Thielicke and Stamhuis, 2014 , Version 1.4; http://pivlab.blogspot.com/.



    Similar Products

    90
    MathWorks Inc matlab toolbox msdanalyzer
    Matlab Toolbox Msdanalyzer, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msdanalyzer+for+matlab/pmc11900878__sciadv__adt8213_sm-141-23-23
    Average 90 stars, based on 1 article reviews
    matlab toolbox msdanalyzer - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    MathWorks Inc msdanalyzer matlab class
    Msdanalyzer Matlab Class, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msdanalyzer+for+matlab/pm39480662-149-20-21
    Average 90 stars, based on 1 article reviews
    msdanalyzer matlab class - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    MathWorks Inc msdanalyzer for matlab
    Msdanalyzer For Matlab, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msdanalyzer+for+matlab/pmc11509142-125-18-22
    Average 90 stars, based on 1 article reviews
    msdanalyzer for matlab - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    MathWorks Inc matlab msdanalyzer
    Matlab Msdanalyzer, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msdanalyzer+for+matlab/pm38374262-317-9-9
    Average 90 stars, based on 1 article reviews
    matlab msdanalyzer - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90

    90
      Buy from Supplier

    90

    90

    Image Search Results


    TEAD1 transcription factor stabilizes YAP condensate (A) Representative 2D confocal immunofluorescence image of a U-2 OS YAP-HaloTag cell plated sparsely, showing both YAP and TEAD1 foci. Magnification of the inset in the merged image. Scale bar: 5 μm. (B) Line scan of the dotted line in the magnified image from (A) showing the overlap of YAP and TEAD1 condensates. (C) Quantification of colocalization between YAP condensates with TEAD1 foci using Mander’s coefficient. ∗∗∗∗: statistically significant difference between YAP condensate/TEAD1 foci colocalization and random nuclear region/TEAD1 foci colocalization ( p < 0.0001, unpaired t test). The center of the data is the mean and the error bars show the s.e.m. (D–M). Live-cell 2D Airyscan images of sparsely plated U-2 OS YAP-HaloTag cells treated with DMSO (D), 50 nM verteporfin (F), 500 nM K-975 (H), 500 nM Peptide 17 (J), and 500 nM CA3 (L) at the indicated time after treatment. Scale bars: 5 μm. Quantification of the YAP condensate numbers in 2D in (E, G, I, K, M) after treatment with each drug at the indicated time. ∗, ∗∗, ∗∗∗: statistically significant differences in the YAP condensate number between pre-treatment and drug-treated samples (∗: p < 0.05, ∗∗: p < 0.01, ∗∗∗: p < 0.001, paired t test). ns: non-significant difference between samples (paired t test). The center of the data is the mean and the error bars show the s.e.m. The average number of condensates during pre-treatment is higher than calculated in <xref ref-type=Figure 1 since only cells containing at least one YAP condensate were analyzed for drug treatments. (N) Normalized number of YAP condensates in 2D in sorbitol-treated, sparsely plated U-2 OS YAP-HaloTag cells per nuclear area, with additional DMSO or Peptide 17 treatments over 1 h. ∗∗, ∗∗∗, ∗∗∗∗: statistically significant difference in the YAP condensate number between DMSO and Peptide 17-treated samples at indicated time points (∗∗: p < 0.01, ∗∗∗: p < 0.001, ∗∗∗∗: p < 0.0001. Unpaired t test). ns: non-significant difference between samples at 0 min (unpaired t test). The center of the data is the mean and the error bars show the s.e.m. (O) Differential Interference Contrast (DIC) images of purified TEAD1 (20 μM) and YAP (15 μM) proteins alone, TEAD1 (15 μM) with crowding agent 20% (w/w) PEG 2k, and TEAD1 (15 μM) and YAP (15 μM) mixed together, showing that mixing of YAP and TEAD1 promotes the phase separation of both proteins. Scale bar is 20 μm. " width="100%" height="100%">

    Journal: iScience

    Article Title: YAP condensates are highly organized hubs

    doi: 10.1016/j.isci.2024.109927

    Figure Lengend Snippet: TEAD1 transcription factor stabilizes YAP condensate (A) Representative 2D confocal immunofluorescence image of a U-2 OS YAP-HaloTag cell plated sparsely, showing both YAP and TEAD1 foci. Magnification of the inset in the merged image. Scale bar: 5 μm. (B) Line scan of the dotted line in the magnified image from (A) showing the overlap of YAP and TEAD1 condensates. (C) Quantification of colocalization between YAP condensates with TEAD1 foci using Mander’s coefficient. ∗∗∗∗: statistically significant difference between YAP condensate/TEAD1 foci colocalization and random nuclear region/TEAD1 foci colocalization ( p < 0.0001, unpaired t test). The center of the data is the mean and the error bars show the s.e.m. (D–M). Live-cell 2D Airyscan images of sparsely plated U-2 OS YAP-HaloTag cells treated with DMSO (D), 50 nM verteporfin (F), 500 nM K-975 (H), 500 nM Peptide 17 (J), and 500 nM CA3 (L) at the indicated time after treatment. Scale bars: 5 μm. Quantification of the YAP condensate numbers in 2D in (E, G, I, K, M) after treatment with each drug at the indicated time. ∗, ∗∗, ∗∗∗: statistically significant differences in the YAP condensate number between pre-treatment and drug-treated samples (∗: p < 0.05, ∗∗: p < 0.01, ∗∗∗: p < 0.001, paired t test). ns: non-significant difference between samples (paired t test). The center of the data is the mean and the error bars show the s.e.m. The average number of condensates during pre-treatment is higher than calculated in Figure 1 since only cells containing at least one YAP condensate were analyzed for drug treatments. (N) Normalized number of YAP condensates in 2D in sorbitol-treated, sparsely plated U-2 OS YAP-HaloTag cells per nuclear area, with additional DMSO or Peptide 17 treatments over 1 h. ∗∗, ∗∗∗, ∗∗∗∗: statistically significant difference in the YAP condensate number between DMSO and Peptide 17-treated samples at indicated time points (∗∗: p < 0.01, ∗∗∗: p < 0.001, ∗∗∗∗: p < 0.0001. Unpaired t test). ns: non-significant difference between samples at 0 min (unpaired t test). The center of the data is the mean and the error bars show the s.e.m. (O) Differential Interference Contrast (DIC) images of purified TEAD1 (20 μM) and YAP (15 μM) proteins alone, TEAD1 (15 μM) with crowding agent 20% (w/w) PEG 2k, and TEAD1 (15 μM) and YAP (15 μM) mixed together, showing that mixing of YAP and TEAD1 promotes the phase separation of both proteins. Scale bar is 20 μm.

    Article Snippet: Diffusion coefficient calculation: MATLAB code msdanalyzer along with custom MATLAB codes were used.

    Techniques: Immunofluorescence, Purification